Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX392481: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-282749' containing sample 'Staphylococcus aureus M0896'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.4M spots, 484M bases, 233.8Mb downloads

UUID: 456bb86d-8bb0-498f-a51b-e8eb08416430

Design: Illumina sequencing of Staphylococcus aureus M0896 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216842 • SRP034452 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0896

SAMN02325793 • SRS515565 • All experiments • All runs

Organism: Staphylococcus aureus M0896

Library:

Name: Pond-282749

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 411050.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WXJI

material_type: DNA:DNA Somatic

product_order: PDO-2121

product_part_number: P-MCV-0001

project: G48349

research_project: RP-433

root_sample_id: SM-4C9LY

sample_id: SM-4WXJI

work_request: 38308

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-18 11:59:18.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 2.4M spots, 484M bases, 233.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1050587	2,396,102	484M	233.8Mb	2013-12-16

ID:: 563336

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